Tupac Cloud T.5: Groundwater modeling of a construction site dewatering with well and trenches

Applied case for the evaluation of a drainage schema on a construction site with Tupac Cloud. The model has three stress periods where the drainage schema starts with well pumping for 10 days and trench drainage with pumping for another 10 days. Results from the water balance were analyzed as well as the final distribution of head on the proposed construction site.

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Tupac Cloud T.4: Transient simulation of the trench excavation impact on a coastal aquifer

Local scale modeling of a 4 stage trench excavation on a coastal aquifer. The main objective of this modeling work is assessing the impact of the excavation on the nearby groundwater flow regime. The modeling work was done entirely with the tools, charts and tables from Tupac Cloud.

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Tupac Cloud Beta Tutorial 3: 3D voronoi model mesh generation as Vtk

From the latest developments in our codes, MF6 and Flopy we have created tools in Tupac Cloud for 3d mesh generation as Vtk files. This is an applied example of this functionality based on a dataset for river - aquifer interaction where the resulting Vtk are plotted on Paraview.

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Introducing Tupac Cloud: An online tool for groundwater modeling

Tupac Cloud is our developing online groundwater modeling platform. Models on Tupac Cloud are based on Voronoi meshes and constructed in MODFLOW 6 DISV from Flopy scripts. The whole project will have lot of tools and integrations with QGIS and Paraview, this is just an example of mesh generation for an applied case of river aquifer interaction.

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How to create quadtree refinements for MODFLOW 6 models from multiple shapefiles - Tutorials

Quadtree refinements are available for Modflow 6 models in the latest versions of Model Muse. This tool can be inplemented for many spatial objects as points, lines or polygons where you can specify the refinement level for each layer separately. We have done an applied case of mesh refinement of a regional model where the river network, observation points and tunnel aligment were defined as refinement objects.

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3D visualization of voronoi gridded models with Model Viewer for Modflow 6 - Tutorial

Model Viewer for Modflow 6 was launched in April 2022 and it is a version of Model Viewer customized to display the features, grid and results of MODFLOW 6 models. We have done an applied case for the visualization of a MODFLOW 6 DISV model that has a voronoi mesh. The tutorial covers the steps to visualize the model grid lines, grid shell, isosurfaces, color grid, flow directions among other visualization options.

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Interactive cross section generator for a voronoi gridded Modflow 6 model - Tutorial

We are allways on the research of new visualization tools for groundwater models and that would imply the review of different apis, codes and backends. This time we have done an applied example for the interactive generation of cross section from a Modflow 6 model with a voronoi mesh on a Jupyter notebook. The cross section shows the model grid, head distribution as a color grid and contours and its generated from the line delineation over the 2d view of the model grid. The code can be easily adapted to any Modflow model by editing the Python and Flopy code.

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Regional groundwater Modflow 6 model with Voronoi Mesh - Tutorial

We have developed a version of our Angascancha basin case study that runs on MODFLOW 6 with discretized by vertices (DISV). The model implements a Voronoi mesh that is generated from the basin boundary and river network and the refinement levels are defined by a minimum and maximum cell size together with determined refinement steps. The tutorial is complete in all the steps involving the model discretization, construction, simulation and visualization.

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River-Well-Aquifer Geospatial Groundwater Flow Model with Voronoi Mesh - Tutorial

This is an applied example of a fully geospatial groundwater flow model with the MODFLOW 6 Disv discretized by vertices option. Model was constructed with Python and Flopy from a series of shapefiles and it has a progressive refinement for well and river boundary conditions. Regional flow has been simulated as a General Head Boundary and plotting options were developed for the grid and model output representation on areal view and cross section.

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New website! MODFLOW Questions and Answers: ask anything on groundwater modeling

Until now we had limited options to provide specific support in groundwater modeling. We know that modeling requires the review of extensive documentation and practical work with the software and sometimes or most times we don't have the time to sort things out.

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Example of Seawater Intrusion Modeling with Modflow 6, Model Muse and Flopy - Tutorial

MODFLOW 6 implements the Buoyancy package for the simulation of variable density and seawater intrusion cases. The tools are implemented in the Python package Flopy, however the workflow has changed substantially from the previous models of flow and transport. We have developed an applied case seawater intrusion model on a regular geometry model constructed with Model Muse for flow and Flopy for transport.

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What to do when your MODFLOW MT3D contaminant plume doesn’t migrate?

This is a problem that every hydrogeologist - numerical modeler has faced many times over his/her professional career independently from the theoretical background and skills with the code, graphical user interface or Python library.

We don’t know why groundwater “flows” and a contaminant plume “migrates” when both move on the aquifer system. After you construct you model geometry, setup the flow boundary condition, specify your transport package, define your contaminant sources, run your MODFLOW flow model and then run your MT3D model (or even your MT3DMS model) you will find that there is no plume, none, nada, nichts.

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Is glTF an alternative to VTK for the representation of voronoi mesh Modflow6 models?

Representation of geospatial objects in 2D are well covered by the GIS software and standards where we have powerful tools and interchangeable spatial files, however when we work on 3D objects the universe of software and tools is like a jungle with a wide variety of issues. We will always consider 3D as the ultimate representation of an object using a computer, by sure the holograms and augmented reality can improve the way we interact with a object geometry, but since we are not in the common near future we will give much effort to the representation of these objects in our computer screens, tables and cellphones.

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How to insert and read Observation Points (OBS6) in Modflow 6 with Model Muse and Flopy - Tutorial

Modflow 6 has a new approach in setting up observation points and it's essentially different to the previous versions. The OBS6 package works not only with heads and drawdowns but also with flows, so it's also possible to calibrate the model against baseflow or any other recorded flow from a boundary condition directly. We have created an applied case of the implementation of piezometers in a hillslope groundwater flow model in Modflow 6 and Model Muse. The tutorial covers all the steps related to the implementation of the observed points in Model Muse as well as the comparison among simulated and observed heads through scripts in Flopy.

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A place to find MODFLOW executables for any operating system: Windows, Mac or Linux

A normal distribution of the core versions of MODFLOW as well as its variants, and Modflow-Based particle tracking and solute transport models includes not only the executables for Windows, but also the documentation, source code, test problems and other utility programs. Working with the multiple tools of Modflow implies a huge collection of files that aren’t useful for the simulation itself if you are working on Windows. Modelers working on Mac or Linux had to compile our executable by themselves.

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What we dont see in the development of open source software for groundwater modeling

Usually we dedicate much time to developing tutorials and sometimes, just a few times, we actually write an article on this blog. Lately, our aim to discover and code is much greater than our impulse to give our opinion. This post is a special case where we write something without knowing if it is written because we are motivated or because there is something that needs to be written. In any case, writing this post doesn’t make us more free or happy... “Es macht uns nicht mehr zufrieden”... because we don´t know much about some things related to human nature.

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Interactive MODFLOW MT3D transport model visualization with Flopy, Ipywidgets and Voila - Tutorial

Representation and analysis of flow and transport results is a challenge for groundwater modelers. Aspects such as speed, compatibility, data format and visualization options are key in the 2D/3D representation of head and concentration on model cells. Under the Jupyterlab framework new tools have been developed that can be useful to represent model results on a user friendly way .

This time we have done a tutorial for the interactive representation of a contaminant plume in Jupyterlab; modeling was done with Modflow Nwt and Mt3d, representation was done with Matplolib, Ipywidgets and Voila.

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Which are the challenges for model calibration in MODFLOW 6?

MODFLOW 6 is the latest version of MODFLOW; we can’t frame this version as new because it has been released in May 2017 when QGIS 3 wasn’t even released or Python 3.6 was the latest version. On the hydrogeological perspective changes don't come as fast as expected and the amount of users of MODFLOW 6 is increasing but there are limitations on the pre/post processing tools that can take the best of the software for the general public.

Besides the philosophical discussion if a model can be “calibrated” or just “validated” there are some changes on the structure of MODFLOW 6 that bring challenges on the traditional way of model calibration.

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Online Voronoi Modflow 6 groundwater modeling with Hakuchik - Tutorial

Because a new year has come with a new way to model groundwater flow using the latest developments of Modflow 6 Disv. We are not exactly sure that we have done a tutorial, or a procedure or a bunch of code and tools together but we are sure that we have done something that can model geospatial groundwater flow online with awesome 3d representations. At the time we launched all the code on the Hakuchik server, we had a feeling of "we did it" and you are entitled to see if our work is good, bad or in progress. We are sure that more development needs to be done but this will be the way of groundwater modeling in the future, hoping that improving the capacities of professionals and concern of the general population will lead to a sustainable management of our groundwater resources.

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Variable density groundwater flow modeling with MODFLOW 6 and BUY package - Tutorial

Coastal aquifers and the interaction among brine / fresh groundwater need to be evaluated with a modeling code that can deal with variable density flow. For more than 18 years, SEAWAT was the prefered (or only) open source solution implemented in Modflow 2000 with some limitations* on its use with Flopy. Now in Modflow 6 the concept of simulation involves flow and transport modeling together with exchange among them. We have done a tutorial with a simple case of variable density flow from a saline lake into an acuifer. The transient model has a duration of 50 days where the saline water "intrudes" the aquifer at the bottom part of the lake.

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